[Omaha.pm] BioPerl lab

[Dr. Dhundy R. Bastola]

J
The genome workbench is interesting. I did not know about it. I think having
it under the bioperl umbrella is still a good choice. It will give more
flexibility. I got the workbench loaded in my laptop. I will share with you
as I learn more about the program and if it is some thing we discussed?
kiran

-----Original Message-----
From: omaha-pm-bounces+kiranbina=gmail.com at pm.org
[mailto:omaha-pm-bounces+kiranbina=gmail.com at pm.org] On Behalf Of Jay Hannah
Sent: Sunday, February 26, 2006 2:04 PM
To: Perl Mongers of Omaha, Nebraska USA
Subject: [Omaha.pm] BioPerl lab

(1) Kiran, have you seen this?

http://www.ncbi.nlm.nih.gov/projects/gbench/

What if we integrated primer group management into Genome Workbench instead
of making it server-side and browser based? Would that be better? Worse? 

I can't seem to get off the ground w/ Genome Workbench on my Mac OSX 10.3.9
(30m of effort). It installed fine, but I can't load any data into it. Maybe
I have another reason to upgrade my OSX now? -grin-

(2) Here's the flow chart we were kicking around this morning:

http://omaha.pm.org/bioperl/bioperl-db-extend.graffle.pdf

(3) Some interesting UNO resources: 

http://www.bioinformatics.unomaha.edu/

The "UNO NCBI Workshop Lecture Slides" are very cool under announcements and
events.

j

Note to self: Check out the clickable bottom section of these web pages:
Pre-generated .png's and image maps.
http://www.ncbi.nlm.nih.gov/entrez/sutils/ncgraph.fcgi?image=main&key=NCID_0
1_446894_service3_9005_1140973822&obj=ProtMap_17014&chrgi=17014&start=1&wind
ow_length=27771&total_length=29751&iscir=0
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