[Curitiba-pm] XML em Perl

Stanislaw Pusep creaktive at gmail.com
Mon Oct 29 10:09:52 PDT 2012


Boa tarde, Guilherme!
Seria algo assim:

#!/usr/bin/env perl
use strict;
use warnings 'all';
use Data::Dumper;
use LWP::Simple;
use XML::Simple;

my $obj = XMLin(get('
http://www.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=taxonomy&id=192'));
print Dumper $obj->{Taxon}{OtherNames}{Synonym};

ABS()



On Mon, Oct 29, 2012 at 2:11 PM, Guilherme Rodrigues Machado <
guilherme.lrm at gmail.com> wrote:

> *Caros, boa tarde.*
>
> Estou utilizando os seguintes módulos:
> - XML::SIMPLE
> - LWP::Simple
>
> Para acessar o seguinte XML
> http://www.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=taxonomy&id=192
>
> O retorno é +/- esse:
>
> $VAR1 = {
>>           'Taxon' => {
>>                        'CreateDate' => '1995/02/27 09:24:00',
>>                        'Division' => 'Bacteria',
>>                        'TaxId' => '192',
>>                        'MitoGeneticCode' => {
>>                                             'MGCId' => '0',
>>                                             'MGCName' => 'Unspecified'
>>                                           },
>>                        'OtherNames' => {
>>                                          'Includes' => 'bacterium
>> ASAZOES-148',
>>                                          'Name' => [
>>                                                    {
>>                                                      'DispName' =>
>> 'Roseomonas fauriae Rihs et al. 1998',
>>                                                      'ClassCDE' =>
>> 'authority'
>>                                                    },
>>                                                    {
>>                                                      'DispName' =>
>> 'strain sp. 7',
>>                                                      'ClassCDE' => 'type
>> material'
>>                                                    }
>>                                                  ],
>>                                          'Synonym' => [
>>                                                       'Roseomonas
>> fauriae',
>>                                                       'Azospirillum
>> brasiliense',
>>                                                       'Spirillum
>> lipoferum'
>>                                                     ]
>>                                        },
>>                        'LineageEx' => {
>>                                       'Taxon' => [
>>                                                  {
>>                                                    'TaxId' => '131567',
>>                                                    'Rank' => 'no rank',
>>                                                    'ScientificName' =>
>> 'cellular organisms'
>>                                                  },
>>                                                  {
>>                                                    'TaxId' => '191',
>>                                                    'Rank' => 'genus',
>>                                                    'ScientificName' =>
>> 'Azospirillum'
>>                                                  }
>>                                                ]
>>                                     },
>>                        'Lineage' => 'cellular organisms; Bacteria;
>> Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae;
>> Azospirillum',
>>                        'Rank' => 'species',
>>                        'GeneticCode' => {
>>                                         'GCName' => 'Bacterial, Archaeal
>> and Plant Plastid',
>>                                         'GCId' => '11'
>>                                       },
>>                        'PubDate' => '1993/04/26 01:00:00',
>>                        'ScientificName' => 'Azospirillum brasilense',
>>                        'UpdateDate' => '2012/10/24 17:17:04',
>>                        'ParentTaxId' => '191'
>>                      }
>>         };
>>
>
>
> Saberia dizer como eu acesso os 3 conteúdos do vetor 'SYNONYM' ?
>
> Muito obrigado.
>
> Grande abraço,
> Guilherme Machado
> UFPR - Mestrando em Bioinformática
>
> _______________________________________________
> Curitiba-pm mailing list
> Curitiba-pm at pm.org
> http://mail.pm.org/mailman/listinfo/curitiba-pm
>
>
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